Course Overview


Course Integrity

This course is compiled automatically on 2021-01-05

The course is tested and available on MacOS, Windows and Ubuntu Linux for R 4.0



Overview

?? This Section is used to build the course website ??

?? What is this course about??

?? Break down of course structure. You can look here for guidance: https://rockefelleruniversity.github.io/Intro_To_R_1Day/??

Course material and exercises are available to view as rendered HTML at https://rockefelleruniversity.github.io/RU_Course_template/. All material is available to download under GPL v2 license.



Setting up


System Requirements

Install R

R can be installed from the R-project website.

The R website can be found here http://www.r-project.org/.

The download links and associated installation instructions for multiple platforms can be found below provided by Revolution Analytics. https://cran.revolutionanalytics.com

Direct downloads for main platforms of R 4.0 can be found below


Install RStudio

RStudio can be installed from the RStudio website.

http://www.rstudio.com/

RStudio can be downloaded for all platforms at the link below

https://rstudio.com/products/rstudio/download/


Install required packages

From the course package

install.packages('BiocManager')
BiocManager::install('RockefellerUniversity/RU_course_template',subdir='MyCoursePackage')


From CRAN and Bioconductor

install.packages('BiocManager')
BiocManager::install('methods')
BiocManager::install('ggplot2')
BiocManager::install('rmarkdown')
BiocManager::install('rio')
BiocManager::install('knitr')
BiocManager::install('testthat')
BiocManager::install('yaml')


Download the material

Download the material




The Presentations


?? My course name?? , Session 1

??What am I focusing on in this section. Bullet point lists are good??

  • Course content
  • Building courses
  • Making it look nice

?? My course name?? , Session 2

??If you have more sections then do this again. what is session 2 about? keep adding more files if needed??

  • Course content
  • Building courses
  • Making it look nice

Getting help


Course help

For advice, help and comments for the material covered in this course please contact us at the issues page associated to this course.

The link to the help pages can be found here


General Bioinformatics support

If you would like contact us about general bioinformatics advice, support or collaboration, please contact us the Bioinformatics Resource Center at .