Course Overview
Course Integrity
This course is compiled automatically on 2025-01-16
The course is tested and available on MacOS, Windows and
Ubuntu Linux for R version 4.4.0 (2024-04-24)
Overview
This course introduces the use BROAD’s Integrative Genome Viewer (IGV) to display genomics data.
Each section is presented as HTML presentations or single page document. Exercises and answer sheets are included to practice techniques and provide future reference examples.
Course material and exercises are available to view as rendered HTML at http://rockefelleruniversity.github.io/IGV_course/. All material is available to download under GPL v3 license.
Setting up
System Requirements
The Presentations
IGV
This course reviews the basics for using the genome browser IGV including:
- Navigating around the IGV dashboard
- Loading data
- Useful tools in IGV
Links to presentations:
The html slide presentation can be found at this link Slide
The single page html presentation can be found at this link Single Page
The code use in the presentations can be found at R code
Getting help
Course help
For advice, help and comments for the material covered in this course please contact us at the issues page associated to this course.
The link to the help pages can be found here
General Bioinformatics support
If you would like contact us about general bioinformatics advice, support or collaboration, please contact us the Bioinformatics Resource Center at brc@rockefeller.edu.