Analysis Support and Consulting

The bioinformatics team provides analysis support for all biological data. The team has a large pool of experience in analysis support from initial data processing and QC through to publication.

As a team, we have analysed more than 10000 high throughput sequencing datasets (including ATAC-seq, ChIP-seq, ChIP-exo, bulk and single cell RNA-seq, MNase-seq, sgRNA-seq and whole genome resequencing) and have contributed to peer-reviews publications and software from The Rockefeller University.

Examples of analysis projects

  • Single cell RNA-seq analysis of changes in gene expression and identification of cell specific pathways.Mapping of transcription factor targets from ChIP-seq and correlation of targets with expression from associated Knock Out experiments.
  • Evaluation of genes important to survival after treatment using sgRNA-seq.
  • Identification of transcript selection, differential exon usage and splicing motifs in RNA-seq data.
  • Analysis and visualization of evolutionary conserved motifs around functional elements.

If you have a question about present or future analysis or require analysis support please contact Thomas Carroll ().

Full list of authorships for BRC members